Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
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Molecular interactions
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ID History
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Gene: Prap1 ENSRNOG00000018446

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Description

proline-rich acidic protein 1 [Source:RGD Symbol;Acc:61876]

Gene Synonyms

Upa

Location

Primary_assembly 1: 204,312,723-204,316,517 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 72 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000024912.6	Prap1-201	635	152aa	ENSRNOP00000024912.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HXF6 Q9ES75	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000107472.2	Prap1-202	547	151aa	ENSRNOP00000095363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GL44	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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