Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Atg4b ENSRNOG00000018403

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Description

autophagy related 4B, cysteine peptidase [Source:RGD Symbol;Acc:1309664]

Gene Synonyms

Apg4b, LOC316640, MGC112887

Location

Primary_assembly 9: 101,726,782-101,761,622 forward strand.

GRCr8:CM070399.1

About this gene

This gene has 4 transcripts (splice variants), 207 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000102482.2	Atg4b-202	3265	469aa	ENSRNOP00000088154.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GGT0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000146122.1	Atg4b-204	3420	396aa	ENSRNOP00000099429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000025529.9	Atg4b-201	3083	393aa	ENSRNOP00000025529.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2QC33-1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000116331.2	Atg4b-203	2814	360aa	ENSRNOP00000079449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQY4	-

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Summary

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