Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Egr3 ENSRNOG00000017828

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Description

early growth response 3 [Source:RGD Symbol;Acc:2545]

Gene Synonyms

EGR-3

Location

Primary_assembly 15: 51,560,344-51,565,712 forward strand.

GRCr8:CM070405.1

About this gene

This gene has 4 transcripts (splice variants), 198 orthologues, 4 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000024067.7	Egr3-201	2427	408aa	ENSRNOP00000024066.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QCU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000094649.2	Egr3-203	3938	387aa	ENSRNOP00000095643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HTI6 P43301	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000116948.2	Egr3-204	3463	402aa	ENSRNOP00000089401.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9R7	-
ENSRNOT00000077072.4	Egr3-202	2514	385aa	ENSRNOP00000068798.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V8L1	-

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Summary

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