Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Oga ENSRNOG00000017822

.

Description

O-GlcNAcase [Source:RGD Symbol;Acc:621077]

Gene Synonyms

LOC108349825, Mgea5

Location

Primary_assembly 1: 254,547,311-254,582,855 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000065172.5	Oga-201	4732	954aa	ENSRNOP00000059568.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UI10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000156205.1	Oga-204	5028	916aa	ENSRNOP00000112378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8VIJ5	-
ENSRNOT00000109554.2	Oga-203	4913	948aa	ENSRNOP00000088821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AAH5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000099772.2	Oga-202	4584	768aa	ENSRNOP00000094869.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALY4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.