Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Sema3f ENSRNOG00000017704

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Description

semaphorin 3F [Source:RGD Symbol;Acc:1308514]

Gene Synonyms

SemaIV

Location

Primary_assembly 8: 117,236,269-117,265,206 reverse strand.

GRCr8:CM070398.1

About this gene

This gene has 4 transcripts (splice variants), 269 orthologues, 19 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000024193.7	Sema3f-201	3866	785aa	ENSRNOP00000024193.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I309 D3ZGX9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000144059.1	Sema3f-203	3773	754aa	ENSRNOP00000100452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I308	-
ENSRNOT00000085915.3	Sema3f-202	3487	771aa	ENSRNOP00000071565.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K0S6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000165502.1	Sema3f-204	2754	723aa	ENSRNOP00000111210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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