Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Tpm3 ENSRNOG00000017441

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Description

tropomyosin 3 [Source:RGD Symbol;Acc:621546]

Gene Synonyms

TM30nm, Tpm5

Location

Primary_assembly 2: 177,814,883-177,842,660 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 8 transcripts (splice variants), 126 orthologues, 3 paralogues and is associated with 16 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000101614.2	Tpm3-204	2278	285aa	ENSRNOP00000094091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140TAF0 A6J6J5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000112248.2	Tpm3-206	2167	248aa	ENSRNOP00000079275.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G322 A6J6K0	-
ENSRNOT00000023567.10	Tpm3-201	2156	248aa	ENSRNOP00000023567.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QDD2	-
ENSRNOT00000101991.2	Tpm3-205	2060	248aa	ENSRNOP00000097306.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B5K9	-
ENSRNOT00000029076.7	Tpm3-203	1771	285aa	ENSRNOP00000035561.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140TAF0 A6J6J5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000166501.1	Tpm3-208	1250	254aa	ENSRNOP00000109938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J6J9	-
ENSRNOT00000023605.9	Tpm3-202	1162	247aa	ENSRNOP00000023605.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QDD9	-
ENSRNOT00000114156.2	Tpm3-207	1107	224aa	ENSRNOP00000085183.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A144	-

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Summary

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