Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Orthologues
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Ontologies
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ID History
- Gene history

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Gene: Ambra1 ENSRNOG00000017422

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Description

autophagy and beclin 1 regulator 1 [Source:RGD Symbol;Acc:621330]

Gene Synonyms

Nyw1

Location

Primary_assembly 3: 77,700,936-77,890,221 forward strand.

mRatBN7.2:CM026976.1

About this gene

This gene has 4 transcripts (splice variants), 226 orthologues and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000045644.6	Ambra1-201	5291	1300aa	ENSRNOP00000039742.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LNQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000093866.1	Ambra1-203	5111	1240aa	ENSRNOP00000087603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGV8	-
ENSRNOT00000085614.2	Ambra1-202	5018	1209aa	ENSRNOP00000073365.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K5B6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000105609.1	Ambra1-204	5018	1180aa	ENSRNOP00000091295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AF66	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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