Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Snx30 ENSRNOG00000017132

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Description

sorting nexin family member 30 [Source:RGD Symbol;Acc:1311367]

Gene Synonyms

LOC298033, RGD1311367

Location

Primary_assembly 5: 79,478,912-79,607,052 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 8 transcripts (splice variants), 202 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000087254.3	Snx30-202	1664	470aa	ENSRNOP00000069076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JUF2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000173326.1	Snx30-208	7218	443aa	ENSRNOP00000101106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000156988.1	Snx30-204	6855	405aa	ENSRNOP00000109497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000169205.1	Snx30-207	2527	424aa	ENSRNOP00000102887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000161925.1	Snx30-206	2181	400aa	ENSRNOP00000107590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000157957.1	Snx30-205	1709	456aa	ENSRNOP00000102520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000108184.2	Snx30-203	1598	431aa	ENSRNOP00000079165.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMF9	-
ENSRNOT00000059419.6	Snx30-201	1559	431aa	ENSRNOP00000056176.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A060	-

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Summary

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