Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Syngr1 ENSRNOG00000017108

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Description

synaptogyrin 1 [Source:RGD Symbol;Acc:3801]

Gene Synonyms

p29

Location

Primary_assembly 7: 113,516,265-113,542,917 forward strand.

GRCr8:CM070397.1

About this gene

This gene has 2 transcripts (splice variants), 238 orthologues, 3 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000145685.1	Syngr1-202	4171	234aa	ENSRNOP00000110355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HSV5 Q62876	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000092260.3	Syngr1-201	1363	191aa	ENSRNOP00000075756.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U1RRP1 A6HSV7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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