Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Snx1 ENSRNOG00000017029

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Description

sorting nexin 1 [Source:RGD Symbol;Acc:68935]

Gene Synonyms

MGC105373

Location

Primary_assembly 8: 75,525,181-75,565,561 reverse strand.

GRCr8:CM070398.1

About this gene

This gene has 4 transcripts (splice variants), 268 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000099946.2	Snx1-202	2031	522aa	ENSRNOP00000088585.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6U3 A6J5H5 Q99N27	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000110848.2	Snx1-203	2006	474aa	ENSRNOP00000076840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y518	-
ENSRNOT00000022960.8	Snx1-201	1980	505aa	ENSRNOP00000022960.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QBU0	-
ENSRNOT00000154143.1	Snx1-204	1574	497aa	ENSRNOP00000106474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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