Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Snx1 ENSRNOG00000017029

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Description

sorting nexin 1 [Source:RGD Symbol;Acc:68935]

Gene Synonyms

MGC105373

Location

Primary_assembly 8: 66,630,086-66,670,360 reverse strand.

mRatBN7.2:CM026981.1

About this gene

This gene has 3 transcripts (splice variants), 267 orthologues, 16 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000022960.7	Snx1-201	1980	505aa	ENSRNOP00000022960.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QBU0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000099946.1	Snx1-202	2233	497aa	ENSRNOP00000088585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6U3	-
ENSRNOT00000110848.1	Snx1-203	1893	474aa	ENSRNOP00000076840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y518	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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