Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Atxn1 ENSRNOG00000016998

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Description

ataxin 1 [Source:RGD Symbol;Acc:3624]

Gene Synonyms

RNSCA1, Sca1

Location

Primary_assembly 17: 19,208,200-19,356,790 forward strand.

GRCr8:CM070407.1

About this gene

This gene has 4 transcripts (splice variants), 265 orthologues, 1 paralogue and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000170287.1	Atxn1-203	2850	841aa	ENSRNOP00000105765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000023140.6	Atxn1-201	5035	789aa	ENSRNOP00000023140.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J718 Q63540	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000160929.1	Atxn1-202	3265	838aa	ENSRNOP00000109752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000172310.1	Atxn1-204	2732	791aa	ENSRNOP00000112684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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