Gene: Simc1 ENSRNOG00000016932

Description

SUMO-interacting motifs containing 1 [Source:RGD Symbol;Acc:2319689]

Gene Synonyms

LOC100361684

Location

Primary_assembly 17: 10,066,855-10,120,237 reverse strand.

GRCr8:CM070407.1

About this gene

This gene has 6 transcripts (splice variants), 183 orthologues, 2 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000157638.1	Simc1-205	4587	1263aa	ENSRNOP00000109121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000044559.8	Simc1-202	4619	1252aa	ENSRNOP00000043680.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZCP7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000121471.1	Simc1-204	4608	1249aa	ENSRNOP00000109535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000169546.1	Simc1-206	4429	1228aa	ENSRNOP00000100206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000064274.6	Simc1-203	4273	1176aa	ENSRNOP00000060156.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QVN4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000022980.7	Simc1-201	2021	453aa	ENSRNOP00000022980.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3Z920	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Gene: Simc1 ENSRNOG00000016932

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Gene: Simc1 ENSRNOG00000016932

Summary

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