Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Acly ENSRNOG00000016924

.

Description

ATP citrate lyase [Source:RGD Symbol;Acc:2018]

Gene Synonyms

ACL, Clatp, MGC124629

Location

Primary_assembly 10: 85,912,402-85,963,631 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 5 transcripts (splice variants), 281 orthologues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000023447.8	Acly-201	4327	1101aa	ENSRNOP00000023447.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HJ39 G3V888	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000043172.6	Acly-202	4297	1091aa	ENSRNOP00000046597.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HJ38 G3V9G4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000114571.2	Acly-204	4279	1085aa	ENSRNOP00000093648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AM81	-
ENSRNOT00000077579.3	Acly-203	4234	1070aa	ENSRNOP00000073397.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K5E7	-
ENSRNOT00000119580.2	Acly-205	1594	491aa	ENSRNOP00000084652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GAT1	-

.

Summary

.

.