Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Ssc5d ENSRNOG00000016687

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Description

scavenger receptor cysteine rich family member with 5 domains [Source:RGD Symbol;Acc:1565772]

Gene Synonyms

LOC308341, RGD1565772

Location

Primary_assembly 1: 77,920,783-77,938,574 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 2 transcripts (splice variants), 400 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000022480.7	Ssc5d-201	4495	1436aa	ENSRNOP00000022480.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KNQ6 D3ZPK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000132939.1	Ssc5d-202	4180	1331aa	ENSRNOP00000100469.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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