Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Csnk1g3 ENSRNOG00000016677

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Description

casein kinase 1, gamma 3 [Source:RGD Symbol;Acc:621408]

Location

Primary_assembly 18: 49,497,839-49,584,828 forward strand.

GRCr8:CM070408.1

About this gene

This gene has 5 transcripts (splice variants), 128 orthologues, 11 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000098391.2	Csnk1g3-202	4245	456aa	ENSRNOP00000079920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G3W6 A6IX38	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000103210.2	Csnk1g3-204	4259	448aa	ENSRNOP00000093418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IX39 Q62763	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000111040.2	Csnk1g3-205	4240	416aa	ENSRNOP00000097230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AUP7 A6IX41	-
ENSRNOT00000022792.7	Csnk1g3-201	1964	434aa	ENSRNOP00000022792.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0A0MXY3	-
ENSRNOT00000101548.2	Csnk1g3-203	1757	371aa	ENSRNOP00000096330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6APG1	-

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Summary

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