Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Scgn ENSRNOG00000016628

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Description

secretagogin, EF-hand calcium binding protein [Source:RGD Symbol;Acc:1303281]

Location

Primary_assembly 17: 41,534,497-41,576,522 forward strand.

GRCr8:CM070407.1

About this gene

This gene has 3 transcripts (splice variants), 263 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000022329.5	Scgn-201	1423	276aa	ENSRNOP00000022329.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LN07	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000107254.2	Scgn-202	1372	259aa	ENSRNOP00000094214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AKC5	-
ENSRNOT00000113807.2	Scgn-203	1363	256aa	ENSRNOP00000097747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AT82	-

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Summary

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