Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Csnk1g1 ENSRNOG00000016620

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Description

casein kinase 1, gamma 1 [Source:RGD Symbol;Acc:621404]

Location

Primary_assembly 8: 75,334,895-75,467,515 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 6 transcripts (splice variants), 308 orthologues, 11 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000116171.2	Csnk1g1-205	2826	467aa	ENSRNOP00000082115.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUI8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000096879.2	Csnk1g1-204	2715	430aa	ENSRNOP00000090680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AAK7	-
ENSRNOT00000096791.2	Csnk1g1-203	1917	459aa	ENSRNOP00000082082.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWD5 A6J5G7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000128467.1	Csnk1g1-206	1809	423aa	ENSRNOP00000107882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000090096.3	Csnk1g1-202	1800	427aa	ENSRNOP00000074148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K7C4	-
ENSRNOT00000042369.5	Csnk1g1-201	1677	390aa	ENSRNOP00000048274.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J5G8 Q62761	-

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Summary

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