Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Hoxc5 ENSRNOG00000016598

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Description

homeo box C5 [Source:RGD Symbol;Acc:1307584]

Gene Synonyms

LOC315341

Location

Primary_assembly 7: 134,150,988-134,154,410 forward strand.

mRatBN7.2:CM026980.1

About this gene

This gene has 1 transcript (splice variant), 192 orthologues, 42 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000022247.5	Hoxc5-201	2734	222aa	ENSRNOP00000022247.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZP88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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