Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Fam171a1 ENSRNOG00000016534

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Description

family with sequence similarity 171, member A1 [Source:RGD Symbol;Acc:1594172]

Gene Synonyms

LOC103694133, LOC680259

Location

Primary_assembly 17: 79,934,050-80,057,495 reverse strand.

GRCr8:CM070407.1

About this gene

This gene has 7 transcripts (splice variants), 207 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000158378.1	Fam171a1-205	3943	911aa	ENSRNOP00000111460.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000106690.2	Fam171a1-202	3882	893aa	ENSRNOP00000091660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEW7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000166833.1	Fam171a1-207	3794	854aa	ENSRNOP00000103310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000166381.1	Fam171a1-206	3732	834aa	ENSRNOP00000101164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000152838.1	Fam171a1-204	3721	817aa	ENSRNOP00000104919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000057851.6	Fam171a1-201	2595	864aa	ENSRNOP00000054660.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A7Y4	-
ENSRNOT00000118771.2	Fam171a1-203	1084	294aa	ENSRNOP00000076443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y4H6	-

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Summary

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