Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Samd13 ENSRNOG00000016432

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Description

sterile alpha motif domain containing 13 [Source:RGD Symbol;Acc:708544]

Gene Synonyms

Djl, LOC56764, rDJL

Location

Primary_assembly 2: 238,194,965-238,233,496 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 5 transcripts (splice variants), 117 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000143671.1	Samd13-203	1763	253aa	ENSRNOP00000101548.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000021984.6	Samd13-201	1951	223aa	ENSRNOP00000021984.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FMA6 Q9QZW8	-
ENSRNOT00000161737.1	Samd13-204	1824	238aa	ENSRNOP00000099241.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000166899.1	Samd13-205	1734	177aa	ENSRNOP00000111773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000102174.2	Samd13-202	863	100aa	ENSRNOP00000096914.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ARW6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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