Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Slc22a17 ENSRNOG00000016414

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Description

solute carrier family 22, member 17 [Source:RGD Symbol;Acc:631405]

Gene Synonyms

24p3R, Boct, MGC116043, rBOCT

Location

Primary_assembly 15: 32,349,944-32,358,785 reverse strand.

GRCr8:CM070405.1

About this gene

This gene has 5 transcripts (splice variants), 228 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000021851.8	Slc22a17-201	2350	626aa	ENSRNOP00000021851.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QB08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000111642.2	Slc22a17-204	2329	513aa	ENSRNOP00000083004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZ20	-
ENSRNOT00000104533.2	Slc22a17-203	2240	580aa	ENSRNOP00000096057.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GLF6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000148730.1	Slc22a17-205	2029	523aa	ENSRNOP00000110441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000102200.2	Slc22a17-202	1733	401aa	ENSRNOP00000082506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZTM9 A6KGX4	-

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Summary

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