Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Ptbp3 ENSRNOG00000016334

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Description

polypyrimidine tract binding protein 3 [Source:RGD Symbol;Acc:621671]

Gene Synonyms

Rod1

Location

Primary_assembly 5: 79,108,376-79,194,508 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 5 transcripts (splice variants), 163 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000136659.1	Ptbp3-204	6965	556aa	ENSRNOP00000098748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000089251.3	Ptbp3-202	6875	554aa	ENSRNOP00000069354.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JV54	-
ENSRNOT00000022107.5	Ptbp3-201	6770	523aa	ENSRNOP00000022107.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UJS5 Q9Z118	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000157596.1	Ptbp3-205	6692	497aa	ENSRNOP00000104044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000116337.2	Ptbp3-203	6584	457aa	ENSRNOP00000092713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AIH3	-

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Summary

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