Gene: Cx3cl1 ENSRNOG00000016326

Description

C-X3-C motif chemokine ligand 1 [Source:RGD Symbol;Acc:620458]

Gene Synonyms

Cx3c, Scyd1

Location

mRatBN7.2:CM026992.1

About this gene

This gene has 2 transcripts (splice variants), 94 orthologues, 13 paralogues and is associated with 54 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000022128.6	Cx3cl1-201	3063	393aa	ENSRNOP00000022128.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IRF7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000112965.1	Cx3cl1-202	4059	390aa	ENSRNOP00000077452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y6B8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary