Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Pdzd9 ENSRNOG00000016292

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Description

PDZ domain containing 9 [Source:RGD Symbol;Acc:1560558]

Gene Synonyms

LOC308954, LRRGT00105

Location

Primary_assembly 1: 184,628,944-184,642,185 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 114 orthologues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000079335.3	Pdzd9-202	2329	333aa	ENSRNOP00000072857.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TUD9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000044384.6	Pdzd9-201	2109	259aa	ENSRNOP00000049377.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7EK64 Q4V8E3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000099167.2	Pdzd9-203	1882	275aa	ENSRNOP00000087193.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A801	-
ENSRNOT00000119069.2	Pdzd9-204	1318	87aa	ENSRNOP00000082442.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUH9	-

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Summary

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