Gene: Col4a1 ENSRNOG00000016281

Description

collagen type IV alpha 1 chain [Source:RGD Symbol;Acc:1307148]

Gene Synonyms

LOC290905

Location

GRCr8:CM070406.1

About this gene

This gene has 5 transcripts (splice variants), 193 orthologues, 36 paralogues and is associated with 42 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000057386.4	Col4a1-201	6579	1669aa	ENSRNOP00000054197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MA59	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000161095.1	Col4a1-204	6552	1660aa	ENSRNOP00000102947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000125691.1	Col4a1-203	6534	1654aa	ENSRNOP00000110576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000173991.1	Col4a1-205	6300	1576aa	ENSRNOP00000101670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000114480.2	Col4a1-202	4974	1562aa	ENSRNOP00000091137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AFK7	-

Summary