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- Splice variants
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Gene: Rpp40 ENSRNOG00000016226

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Description

ribonuclease P/MRP subunit p40 [Source:RGD Symbol;Acc:1310228]

Gene Synonyms

LOC291071, MGC108849

Location

Primary_assembly 17: 29,153,180-29,162,241 forward strand.

GRCr8:CM070407.1

About this gene

This gene has 4 transcripts (splice variants) and 200 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000068617.5	Rpp40-202	1193	376aa	ENSRNOP00000062962.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QUY7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000021877.7	Rpp40-201	1235	303aa	ENSRNOP00000021877.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BK64-2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000103750.2	Rpp40-203	1085	340aa	ENSRNOP00000078066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y2C9	-
ENSRNOT00000130450.1	Rpp40-204	1058	331aa	ENSRNOP00000108962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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