Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Cdh17 ENSRNOG00000015562

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Description

cadherin 17 [Source:RGD Symbol;Acc:619748]

Location

Primary_assembly 5: 30,060,090-30,112,226 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 3 transcripts (splice variants), 198 orthologues, 33 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000095525.2	Cdh17-202	3536	842aa	ENSRNOP00000084699.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZV9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000021612.6	Cdh17-201	3464	827aa	ENSRNOP00000021612.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6II73 P55281	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000101237.2	Cdh17-203	3147	774aa	ENSRNOP00000096139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ANM1	-

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Summary

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