Gene: Tfap2a ENSRNOG00000015522

Description

transcription factor AP-2 alpha [Source:RGD Symbol;Acc:1310267]

Gene Synonyms

LOC306862, Tcfap2a

Location

Primary_assembly 17: 24,229,910-24,253,219 forward strand.

GRCr8:CM070407.1

About this gene

This gene has 7 transcripts (splice variants), 199 orthologues, 4 paralogues and is associated with 18 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000103008.2	Tfap2a-203	3494	530aa	ENSRNOP00000082537.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G9K6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000109680.2	Tfap2a-206	3355	476aa	ENSRNOP00000081532.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZSF0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000107954.2	Tfap2a-205	3350	482aa	ENSRNOP00000088142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GGS6	-
ENSRNOT00000041960.7	Tfap2a-201	3286	431aa	ENSRNOP00000040925.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J784 G3V9A8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000102035.2	Tfap2a-202	3203	433aa	ENSRNOP00000078814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G3W2 A6J782	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000110879.2	Tfap2a-207	3016	437aa	ENSRNOP00000094618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMM5	-
ENSRNOT00000105131.2	Tfap2a-204	2949	414aa	ENSRNOP00000076636.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y4U0	-

Gene: Tfap2a ENSRNOG00000015522

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Gene: Tfap2a ENSRNOG00000015522

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