Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Bpifb1 ENSRNOG00000015468

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Description

BPI fold containing family B, member 1 [Source:RGD Symbol;Acc:1563047]

Gene Synonyms

LOC499926, Lplunc1, MGC156708, RGD1563047

Location

Primary_assembly 3: 163,133,151-163,166,419 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 4 transcripts (splice variants), 100 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000118757.2	Bpifb1-204	1707	509aa	ENSRNOP00000082300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZV17	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000108761.2	Bpifb1-203	1695	481aa	ENSRNOP00000094209.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJ25	-
ENSRNOT00000055342.6	Bpifb1-201	1601	473aa	ENSRNOP00000052209.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140TAH2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000105121.2	Bpifb1-202	1488	476aa	ENSRNOP00000094613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AL65	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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