Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Calcoco1 ENSRNOG00000015447

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Description

calcium binding and coiled coil domain 1 [Source:RGD Symbol;Acc:619812]

Gene Synonyms

KIAA1536, LOC100912282, MGC93160

Location

Primary_assembly 7: 135,713,208-135,727,928 reverse strand.

GRCr8:CM070397.1

About this gene

This gene has 3 transcripts (splice variants), 251 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000089290.3	Calcoco1-203	2236	715aa	ENSRNOP00000071559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K0S1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000021523.8	Calcoco1-201	2947	691aa	ENSRNOP00000021522.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KCX8 Q66HR5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000070855.3	Calcoco1-202	2692	606aa	ENSRNOP00000064554.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QVZ6	-

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Summary

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