Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pip5k1b ENSRNOG00000015232

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Description

phosphatidylinositol-4-phosphate 5-kinase type 1 beta [Source:RGD Symbol;Acc:1310914]

Gene Synonyms

LOC309419, MGC105713, Pip5k1a

Location

Primary_assembly 1: 231,340,606-231,496,812 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 3 transcripts (splice variants), 273 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000068645.6	Pip5k1b-201	2359	539aa	ENSRNOP00000063506.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QVD3 Q5CZZ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000076537.3	Pip5k1b-202	2203	487aa	ENSRNOP00000068410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MK77	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000164404.1	Pip5k1b-203	1770	509aa	ENSRNOP00000109124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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