Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Apba1 ENSRNOG00000014928

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Description

amyloid beta protein binding family A member 1 [Source:RGD Symbol;Acc:620844]

Gene Synonyms

Mint1, mint-1

Location

Primary_assembly 1: 230,790,297-230,995,986 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 3 transcripts (splice variants), 280 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000020123.6	Apba1-201	6621	841aa	ENSRNOP00000020123.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I0P3 F1LR60	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000094213.2	Apba1-202	6618	840aa	ENSRNOP00000089303.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9Y2	-
ENSRNOT00000108892.2	Apba1-203	5115	452aa	ENSRNOP00000105897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A3M6 A6I0P5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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