Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Srbd1 ENSRNOG00000014720

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Description

S1 RNA binding domain 1 [Source:RGD Symbol;Acc:1562788]

Gene Synonyms

LOC301665, RGD1562788

Location

Primary_assembly 6: 14,228,461-14,443,047 forward strand.

GRCr8:CM070396.1

About this gene

This gene has 6 transcripts (splice variants) and 206 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000019894.9	Srbd1-201	3700	983aa	ENSRNOP00000019895.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A9B0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000154663.1	Srbd1-206	3523	924aa	ENSRNOP00000099903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000111529.2	Srbd1-203	3396	954aa	ENSRNOP00000096007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GLE9	-
ENSRNOT00000144704.1	Srbd1-204	3366	944aa	ENSRNOP00000102267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000149791.1	Srbd1-205	3097	888aa	ENSRNOP00000101247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000096560.2	Srbd1-202	1044	170aa	ENSRNOP00000094376.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AKN6	-

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Summary

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