Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Snx19 ENSRNOG00000014719

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Description

sorting nexin 19 [Source:RGD Symbol;Acc:1309857]

Gene Synonyms

LOC315478

Location

Primary_assembly 8: 28,829,886-28,867,061 forward strand.

mRatBN7.2:CM026981.1

About this gene

This gene has 3 transcripts (splice variants), 264 orthologues, 3 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000097104.1	Snx19-202	4283	926aa	ENSRNOP00000089305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ABN1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000020041.7	Snx19-201	5509	890aa	ENSRNOP00000020041.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZXB9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000114121.1	Snx19-203	4535	923aa	ENSRNOP00000089870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ACJ7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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