Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Odf2 ENSRNOG00000014584

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Description

outer dense fiber of sperm tails 2 [Source:RGD Symbol;Acc:3229]

Location

Primary_assembly 3: 33,558,832-33,605,076 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 7 transcripts (splice variants), 248 orthologues, 1 paralogue and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000106575.2	Odf2-205	4237	826aa	ENSRNOP00000086048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GDL7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000020407.7	Odf2-202	4633	811aa	ENSRNOP00000020407.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHM4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000041921.7	Odf2-204	3294	769aa	ENSRNOP00000041336.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AYX5-2	-
ENSRNOT00000163360.1	Odf2-206	2837	661aa	ENSRNOP00000103782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000040457.6	Odf2-203	2455	657aa	ENSRNOP00000049041.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UM86	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000168851.1	Odf2-207	2204	661aa	ENSRNOP00000106847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000020073.9	Odf2-201	2103	662aa	ENSRNOP00000020073.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V7X0	-

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Summary

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