Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Ssr1 ENSRNOG00000014165

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Description

signal sequence receptor subunit 1 [Source:RGD Symbol;Acc:1310961]

Gene Synonyms

Ac2-238, LOC361233

Location

Primary_assembly 17: 27,039,269-27,067,348 forward strand.

GRCr8:CM070407.1

About this gene

This gene has 5 transcripts (splice variants) and 235 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000077994.3	Ssr1-202	1735	347aa	ENSRNOP00000071334.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K075	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000084090.3	Ssr1-203	2423	287aa	ENSRNOP00000070389.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXS8 Q4V7D1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000019040.6	Ssr1-201	1966	292aa	ENSRNOP00000019040.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7F9K1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000109967.2	Ssr1-205	1823	273aa	ENSRNOP00000083441.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVE2 A0A8I6GKJ3	-
ENSRNOT00000089736.3	Ssr1-204	1054	319aa	ENSRNOP00000070167.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JX79 Q7TPJ0	-

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Summary

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