Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Matn4 ENSRNOG00000014021

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Description

matrilin 4 [Source:RGD Symbol;Acc:1309732]

Gene Synonyms

LOC296358

Location

Primary_assembly 3: 173,539,966-173,554,984 reverse strand.

GRCr8:CM070393.1

About this gene

This gene has 5 transcripts (splice variants), 208 orthologues, 14 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000018844.8	Matn4-201	2292	624aa	ENSRNOP00000018844.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JX80 D3ZMS3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000130912.1	Matn4-204	2326	618aa	ENSRNOP00000103044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000158400.1	Matn4-205	2169	583aa	ENSRNOP00000107117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000101725.2	Matn4-202	2169	583aa	ENSRNOP00000082334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G9C5	-
ENSRNOT00000106259.2	Matn4-203	2046	542aa	ENSRNOP00000085435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1D0	-

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Summary

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