Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Fbxo16 ENSRNOG00000014003

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Description

F-box protein 16 [Source:RGD Symbol;Acc:1305049]

Gene Synonyms

LOC305970

Location

Primary_assembly 15: 43,667,855-43,734,346 forward strand.

GRCr8:CM070405.1

About this gene

This gene has 4 transcripts (splice variants), 196 orthologues, 15 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000018762.9	Fbxo16-201	1267	334aa	ENSRNOP00000018762.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P5P4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000097526.2	Fbxo16-202	1459	322aa	ENSRNOP00000093989.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGU5	-
ENSRNOT00000133109.1	Fbxo16-204	1163	334aa	ENSRNOP00000102953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000120133.2	Fbxo16-203	1016	289aa	ENSRNOP00000087577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A636	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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