Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Sbno2 ENSRNOG00000013987

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Description

strawberry notch homolog 2 [Source:RGD Symbol;Acc:1307194]

Gene Synonyms

LOC314619, RGD1307194, Stno

Location

Primary_assembly 7: 10,253,248-10,300,176 forward strand.

GRCr8:CM070397.1

About this gene

This gene has 3 transcripts (splice variants), 212 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000077146.3	Sbno2-202	4803	1351aa	ENSRNOP00000071247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JZZ8 A6K8R6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000068197.5	Sbno2-201	4486	1284aa	ENSRNOP00000062533.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K8R8 D3ZDU8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000099606.2	Sbno2-203	4418	1277aa	ENSRNOP00000084971.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A186 A6K8R9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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