Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Pef1 ENSRNOG00000013972

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Description

penta-EF hand domain containing 1 [Source:RGD Symbol;Acc:1359536]

Gene Synonyms

MGC95159

Location

Primary_assembly 5: 147,735,976-147,761,092 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 2 transcripts (splice variants), 220 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000119178.2	Pef1-202	3369	293aa	ENSRNOP00000090673.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AA23	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000018742.7	Pef1-201	3348	283aa	ENSRNOP00000018742.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6ISN1 Q641Z8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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