Gene: Clca2 ENSRNOG00000013771

Description

chloride channel accessory 2 [Source:RGD Symbol;Acc:1304894]

Gene Synonyms

Clca5, LOC308016

Location

GRCr8:CM070392.1

About this gene

This gene has 2 transcripts (splice variants), 121 orthologues, 4 paralogues and is associated with 1 phenotype.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000018435.7	Clca2-201	4125	965aa	ENSRNOP00000018435.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZVT7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000143188.1	Clca2-202	2798	869aa	ENSRNOP00000103197.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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