Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Stmn3 ENSRNOG00000013657

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Description

stathmin 3 [Source:RGD Symbol;Acc:3628]

Gene Synonyms

Sclip

Location

Primary_assembly 3: 168,416,810-168,425,056 reverse strand.

mRatBN7.2:CM026976.1

About this gene

This gene has 4 transcripts (splice variants), 173 orthologues, 5 paralogues and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000109612.1	Stmn3-204	5486	184aa	ENSRNOP00000095748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ANU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000079262.2	Stmn3-202	1222	180aa	ENSRNOP00000074686.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K8P5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000018697.7	Stmn3-201	925	180aa	ENSRNOP00000018697.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZI49	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000109405.1	Stmn3-203	836	175aa	ENSRNOP00000089824.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9I7	-

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Summary

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