Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pde7b ENSRNOG00000013436

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Description

phosphodiesterase 7B [Source:RGD Symbol;Acc:621016]

Location

Primary_assembly 1: 15,182,704-15,492,900 reverse strand.

mRatBN7.2:CM026974.1

About this gene

This gene has 5 transcripts (splice variants), 189 orthologues, 20 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000113170.1	Pde7b-204	9734	498aa	ENSRNOP00000083905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWQ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000117741.1	Pde7b-205	1981	420aa	ENSRNOP00000088274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9G5	-
ENSRNOT00000078586.2	Pde7b-202	1753	446aa	ENSRNOP00000070401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8VIE4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000018556.7	Pde7b-201	1722	459aa	ENSRNOP00000018556.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8VIE2	-
ENSRNOT00000101303.1	Pde7b-203	1715	465aa	ENSRNOP00000094058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AIQ8	-

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Summary

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