Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Clca5 ENSRNOG00000013334

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Description

chloride channel accessory 5 [Source:RGD Symbol;Acc:621100]

Gene Synonyms

CLCA, Clca2, Clca4, LOC362052, rbCLCA

Location

Primary_assembly 2: 236,456,929-236,479,220 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 2 transcripts (splice variants), 129 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000085670.3	Clca5-202	3304	903aa	ENSRNOP00000071331.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5LIC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000083535.3	Clca5-201	1610	514aa	ENSRNOP00000074850.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K941	-

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Summary

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