Gene: Atp2c1 ENSRNOG00000013305

Description

ATPase secretory pathway Ca2+ transporting 1 [Source:RGD Symbol;Acc:621311]

Gene Synonyms

LOC103690457, MGC93231, Spca1

Location

Primary_assembly 8: 114,913,415-115,038,826 reverse strand.

GRCr8:CM070398.1

About this gene

This gene has 10 transcripts (splice variants), 225 orthologues, 21 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000102340.2	Atp2c1-206	4748	953aa	ENSRNOP00000083761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G9F5 A6I2N3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000095638.2	Atp2c1-203	4914	919aa	ENSRNOP00000096296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GM06 A6I2N4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000099084.2	Atp2c1-205	4658	923aa	ENSRNOP00000076661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y5G2	-
ENSRNOT00000163050.1	Atp2c1-210	4580	934aa	ENSRNOP00000104161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000112729.2	Atp2c1-208	4504	927aa	ENSRNOP00000089204.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6R2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000097914.2	Atp2c1-204	3782	923aa	ENSRNOP00000088420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A662	-
ENSRNOT00000045087.7	Atp2c1-202	3134	888aa	ENSRNOP00000045953.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M9B5	-
ENSRNOT00000119741.2	Atp2c1-209	3083	871aa	ENSRNOP00000097217.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B5G9	-
ENSRNOT00000103991.2	Atp2c1-207	2983	928aa	ENSRNOP00000085864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4Z3	-
ENSRNOT00000018175.10	Atp2c1-201	2631	876aa	ENSRNOP00000018175.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M281	-

Gene: Atp2c1 ENSRNOG00000013305

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Gene: Atp2c1 ENSRNOG00000013305

Summary

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