Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Gpbp1 ENSRNOG00000013002

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Description

GC-rich promoter binding protein 1 [Source:RGD Symbol;Acc:1305492]

Gene Synonyms

LOC294734, RGD1305492

Location

Primary_assembly 2: 44,756,861-44,824,315 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 2 transcripts (splice variants), 144 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000090616.3	Gpbp1-202	3491	493aa	ENSRNOP00000073461.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K5K6 A6I5M9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000036658.8	Gpbp1-201	3401	473aa	ENSRNOP00000038526.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1WBV9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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