Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Sh3glb1 ENSRNOG00000012957

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Description

SH3 domain -containing GRB2-like endophilin B1 [Source:RGD Symbol;Acc:1304859]

Gene Synonyms

LOC292156

Location

Primary_assembly 2: 236,410,436-236,445,140 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 4 transcripts (splice variants), 269 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000104475.2	Sh3glb1-203	1878	402aa	ENSRNOP00000093719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AKY2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000017770.7	Sh3glb1-201	2382	355aa	ENSRNOP00000017771.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K714 Q6AYE2	-
ENSRNOT00000098552.2	Sh3glb1-202	1854	394aa	ENSRNOP00000092051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ADA0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000109147.2	Sh3glb1-204	1271	330aa	ENSRNOP00000078654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZL78	-

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Summary

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