Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Cklf ENSRNOG00000012752

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Description

chemokine-like factor [Source:RGD Symbol;Acc:620708]

Gene Synonyms

Cklf1

Location

Primary_assembly 19: 697,451-712,998 reverse strand.

GRCr8:CM070409.1

About this gene

This gene has 6 transcripts (splice variants), 147 orthologues, 16 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000017127.8	Cklf-201	779	161aa	ENSRNOP00000017127.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9JK79-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000121142.1	Cklf-206	1607	146aa	ENSRNOP00000101131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000096547.2	Cklf-202	525	119aa	ENSRNOP00000088472.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9V2	-
ENSRNOT00000106021.2	Cklf-204	505	98aa	ENSRNOP00000085854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9JK79-2	-
ENSRNOT00000097455.2	Cklf-203	456	96aa	ENSRNOP00000085411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1B3	-
ENSRNOT00000115456.2	Cklf-205	420	84aa	ENSRNOP00000087290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A428	-

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Summary

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