Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Cwc22 ENSRNOG00000012651

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Description

CWC22 spliceosome associated protein [Source:RGD Symbol;Acc:1565385]

Gene Synonyms

LOC362153, RGD1565385

Location

Primary_assembly 3: 83,209,194-83,271,513 reverse strand.

GRCr8:CM070393.1

About this gene

This gene has 4 transcripts (splice variants), 229 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000118363.2	Cwc22-204	3099	906aa	ENSRNOP00000092657.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GJW5 A6HMK0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000103122.2	Cwc22-202	3274	905aa	ENSRNOP00000095427.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJM5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000037684.8	Cwc22-201	2933	898aa	ENSRNOP00000039180.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LY38	-
ENSRNOT00000104366.2	Cwc22-203	2495	725aa	ENSRNOP00000079427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G3A2	-

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Summary

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