Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Lpxn ENSRNOG00000012611

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Description

leupaxin [Source:RGD Symbol;Acc:1304981]

Gene Synonyms

LOC293783, MGC108942

Location

Primary_assembly 1: 219,353,708-219,387,742 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 5 transcripts (splice variants), 200 orthologues, 2 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000095033.2	Lpxn-202	1727	398aa	ENSRNOP00000077943.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YCK6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000152331.1	Lpxn-205	1843	391aa	ENSRNOP00000111449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000112685.2	Lpxn-203	1825	385aa	ENSRNOP00000076938.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y5Q9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000017109.8	Lpxn-201	1713	386aa	ENSRNOP00000017109.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5M852	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000142874.1	Lpxn-204	1531	396aa	ENSRNOP00000110309.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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